RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g16180.4 View Network Show in Genome Browser |
| Other Names | Os01g0267100 |
| Description | MT-A70 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9159765-9165687 Nucleotide Length: 2262 |
| Protein-coding | LOC_Os01g16180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os06g10690 LOC_Os10g02630 LOC_Os01g67590 LOC_Os05g49230 LOC_Os07g45360 LOC_Os04g53760 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g16180.4 |
| Rice Genome Annotation | LOC_Os01g16180.4 |
| Ricechip | LOC_Os01g16180.4 |
| KEGG | osa:4324378 dosa:Os01t0267100-01 |
| Entrez-Gene | 4324378 |