RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g16520.1 View Network Show in Genome Browser |
| Other Names | Os01g0271200 |
| Description | glutamyl-tRNA synthetase, cytoplasmic, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9373716-9378204 Nucleotide Length: 2148 |
| Protein-coding | LOC_Os01g16520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn00970 rn01100 rn01110 |
| Metacyc Pathways | TRNA-CHARGING-PWY PWY-5188 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g16520.1 |
| Rice Genome Annotation | LOC_Os01g16520.1 |
| Ricechip | LOC_Os01g16520.1 |
| KEGG | osa:4325167 dosa:Os01t0271200-01 |
| Entrez-Gene | 4325167 |