RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g16890.2 View Network Show in Genome Browser |
| Other Names | Os01g0276000 |
| Description | ribosomal protein L7Ae, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9657980-9661279 Nucleotide Length: 321 |
| Protein-coding | LOC_Os01g16890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10820 LOC_Os01g04730 LOC_Os01g03070 LOC_Os01g07080 LOC_Os01g13080 LOC_Os01g10050 LOC_Os01g16200 LOC_Os01g09320 LOC_Os01g13730 |
| Downstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os09g32976 LOC_Os08g23710 LOC_Os07g10720 LOC_Os01g61814 LOC_Os02g47140 LOC_Os02g27760 LOC_Os04g50990 LOC_Os05g48310 LOC_Os03g18570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g16890.2 |
| Rice Genome Annotation | LOC_Os01g16890.2 |
| Ricechip | LOC_Os01g16890.2 |
| KEGG | osa:4324441 dosa:Os01t0276000-01 |
| Entrez-Gene | 4324441 |