RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g16940.1 View Network Show in Genome Browser |
| Other Names | Os01g0276500 |
| Description | MazG nucleotide pyrophosphohydrolase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9684830-9689518 Nucleotide Length: 921 |
| Protein-coding | LOC_Os01g16940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13190 LOC_Os01g16890 LOC_Os01g08930 LOC_Os01g10820 LOC_Os01g07500 |
| Downstream Genes | LOC_Os04g52710 LOC_Os05g33260 LOC_Os03g54230 LOC_Os03g15120 LOC_Os03g04169 LOC_Os08g10570 LOC_Os08g44530 LOC_Os09g08430 LOC_Os05g40820 LOC_Os01g59990 LOC_Os05g41110 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00340 rn01100 rn01110 |
| Metacyc Pathways | HISTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g16940.1 |
| Rice Genome Annotation | LOC_Os01g16940.1 |
| Ricechip | LOC_Os01g16940.1 |
| KEGG | osa:4324261 dosa:Os01t0276500-01 |
| Entrez-Gene | 4324261 |