RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g17050.1 View Network Show in Genome Browser |
| Other Names | Os01g0278000 |
| Description | VQ domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9770015-9771037 Nucleotide Length: 708 |
| Protein-coding | LOC_Os01g17050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os04g48850 LOC_Os03g21030 LOC_Os10g42650 LOC_Os06g45570 LOC_Os05g44270 LOC_Os04g55240 LOC_Os02g33600 LOC_Os06g11510 LOC_Os01g70790 LOC_Os06g41450 LOC_Os04g46240 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1870-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g17050.1 |
| Rice Genome Annotation | LOC_Os01g17050.1 |
| Ricechip | LOC_Os01g17050.1 |
| KEGG | osa:4324271 dosa:Os01t0278000-00 |
| Entrez-Gene | 4324271 |