RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g17160.1 View Network Show in Genome Browser |
| Other Names | Os01g0279000,Os01g0278950 |
| Description | OsSubt1 - Putative Subtilisin homologue, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9866424-9870864 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os01g17160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g38440 LOC_Os11g34860 LOC_Os06g43680 LOC_Os10g40590 LOC_Os11g43640 LOC_Os04g51380 LOC_Os05g35050 LOC_Os02g09130 LOC_Os07g12770 LOC_Os03g60260 LOC_Os01g56420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g17160.1 |
| Rice Genome Annotation | LOC_Os01g17160.1 |
| Ricechip | LOC_Os01g17160.1 |
| KEGG | osa:4326900 dosa:Os01t0279000-01dosa:Os01t0278950-00 |
| Entrez-Gene | 4326900 |