RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g17190.1 View Network Show in Genome Browser |
| Other Names | Os01g0279300 |
| Description | OsCam3 - Calmodulin, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9887626-9889328 Nucleotide Length: 450 |
| Protein-coding | LOC_Os01g17190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16190 LOC_Os01g04730 LOC_Os01g07520 LOC_Os01g16640 LOC_Os01g10820 LOC_Os01g08450 |
| Downstream Genes | LOC_Os03g48140 LOC_Os06g29350 LOC_Os02g55880 LOC_Os03g53660 LOC_Os02g10740 LOC_Os12g37560 LOC_Os02g02750 LOC_Os06g51250 LOC_Os06g51510 LOC_Os03g59590 LOC_Os08g25010 More.. |
| Reference | |
|---|---|
| PubMed | 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g17190.1 |
| Rice Genome Annotation | LOC_Os01g17190.1 |
| Ricechip | LOC_Os01g17190.1 |
| KEGG | osa:4326903 dosa:Os01t0279300-01 |
| Entrez-Gene | 4326903 |