RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g17320.1 View Network Show in Genome Browser |
| Other Names | Os01g0280400 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 9962629-9966966 Nucleotide Length: 1836 |
| Protein-coding | LOC_Os01g17320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 |
| Downstream Genes | LOC_Os03g63410 LOC_Os05g08360 LOC_Os02g57590 LOC_Os03g22880 LOC_Os03g13800 LOC_Os02g47760 LOC_Os01g74650 LOC_Os02g01230 LOC_Os09g20090 LOC_Os08g42380 LOC_Os03g18840 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g17320.1 |
| Rice Genome Annotation | LOC_Os01g17320.1 |
| Ricechip | LOC_Os01g17320.1 |
| KEGG | osa:4326909 dosa:Os01t0280400-00 |
| Entrez-Gene | 4326909 |