RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g18100.1 View Network Show in Genome Browser |
| Other Names | Os01g0283500 |
| Description | OsRhmbd3 - Putative Rhomboid homologue, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10137215-10140159 Nucleotide Length: 1053 |
| Protein-coding | LOC_Os01g18100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07070 LOC_Os01g12880 LOC_Os01g05430 |
| Downstream Genes | LOC_Os01g55740 LOC_Os09g35730 LOC_Os11g47840 LOC_Os09g28100 LOC_Os05g13370 LOC_Os02g22100 LOC_Os03g50430 LOC_Os02g10920 LOC_Os01g59980 LOC_Os09g12800 LOC_Os08g41010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g18100.1 |
| Rice Genome Annotation | LOC_Os01g18100.1 |
| Ricechip | LOC_Os01g18100.1 |
| KEGG | osa:4327907 dosa:Os01t0283500-02 |
| Entrez-Gene | 4327907 |