RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g18240.1 View Network Show in Genome Browser |
| Other Names | Os01g0285300 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10217247-10219696 Nucleotide Length: 1287 |
| Protein-coding | LOC_Os01g18240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 |
| Downstream Genes | LOC_Os03g63540 LOC_Os05g04820 LOC_Os03g64320 LOC_Os02g33550 LOC_Os06g36050 LOC_Os05g32110 LOC_Os03g16980 LOC_Os05g13900 LOC_Os04g32030 LOC_Os05g08370 LOC_Os03g61740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g18240.1 |
| Rice Genome Annotation | LOC_Os01g18240.1 |
| Ricechip | LOC_Os01g18240.1 |
| KEGG | osa:4327914 dosa:Os01t0285300-01 |
| Entrez-Gene | 4327914 |