RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19130.1 View Network Show in Genome Browser |
| Other Names | Os01g0295700 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10805496-10808081 Nucleotide Length: 1143 |
| Protein-coding | LOC_Os01g19130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13060 LOC_Os01g02460 LOC_Os01g18800 LOC_Os01g05940 LOC_Os01g01740 LOC_Os01g04460 LOC_Os01g06240 LOC_Os01g09200 LOC_Os01g04409 LOC_Os01g14860 LOC_Os01g04490 More.. |
| Downstream Genes | LOC_Os02g40860 LOC_Os01g45620 LOC_Os06g26340 LOC_Os02g56560 LOC_Os10g33650 LOC_Os04g35114 LOC_Os12g38860 LOC_Os04g06244 LOC_Os03g49750 LOC_Os02g17910 LOC_Os01g26280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19130.1 |
| Rice Genome Annotation | LOC_Os01g19130.1 |
| Ricechip | LOC_Os01g19130.1 |
| KEGG | osa:4326717 dosa:Os01t0295700-01 |
| Entrez-Gene | 4326717 |