RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19140.1 View Network Show in Genome Browser |
| Other Names | Os01g0295900 |
| Description | O-sialoglycoprotein endopeptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10813997-10818530 Nucleotide Length: 453 |
| Protein-coding | LOC_Os01g19140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g09590 LOC_Os04g54330 LOC_Os08g37860 LOC_Os05g34590 LOC_Os06g09679 LOC_Os02g54060 LOC_Os02g07230 LOC_Os03g47260 LOC_Os06g09688 LOC_Os09g26730 LOC_Os02g22780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1440b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19140.1 |
| Rice Genome Annotation | LOC_Os01g19140.1 |
| Ricechip | LOC_Os01g19140.1 |
| KEGG | osa:4326718 dosa:Os01t0295900-01 |
| Entrez-Gene | 4326718 |