RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19220.1 View Network Show in Genome Browser |
| Other Names | Os01g0296700 |
| Description | beta-D-xylosidase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10871371-10874265 Nucleotide Length: 2457 |
| Protein-coding | LOC_Os01g19220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 |
| Downstream Genes | LOC_Os05g28520 LOC_Os05g41990 LOC_Os03g02040 LOC_Os01g41120 LOC_Os05g20050 LOC_Os03g20710 LOC_Os09g33690 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19220.1 |
| Rice Genome Annotation | LOC_Os01g19220.1 |
| Ricechip | LOC_Os01g19220.1 |
| KEGG | osa:4326722 dosa:Os01t0296700-01 |
| Entrez-Gene | 4326722 |