RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19450.1 View Network Show in Genome Browser |
| Other Names | Os01g0300200 |
| Description | ATP-citrate synthase subunit 1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 10999316-11006013 Nucleotide Length: 1827 |
| Protein-coding | LOC_Os01g19450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10840 LOC_Os01g14860 LOC_Os01g19150 |
| Downstream Genes | LOC_Os02g40830 LOC_Os11g47120 LOC_Os11g47330 LOC_Os12g37870 LOC_Os02g31040 LOC_Os04g32330 LOC_Os04g32020 LOC_Os07g49520 LOC_Os08g02640 LOC_Os09g20440 LOC_Os03g13380 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00020 rn00720 rn01100 rn01110 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19450.1 |
| Rice Genome Annotation | LOC_Os01g19450.1 |
| Ricechip | LOC_Os01g19450.1 |
| KEGG | osa:4325777 dosa:Os01t0300200-01 |
| Entrez-Gene | 4325777 |