RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19470.1 View Network Show in Genome Browser |
| Other Names | Os01g0300600 |
| Description | nodal modulator 1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11025443-11038870 Nucleotide Length: 3582 |
| Protein-coding | LOC_Os01g19470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g17430 LOC_Os01g14950 LOC_Os01g08450 |
| Downstream Genes | LOC_Os02g02410 LOC_Os01g51380 LOC_Os06g37180 LOC_Os11g09280 LOC_Os02g01010 LOC_Os08g19850 LOC_Os02g46990 LOC_Os03g51600 LOC_Os03g06190 LOC_Os02g02750 LOC_Os02g12850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19470.1 |
| Rice Genome Annotation | LOC_Os01g19470.1 |
| Ricechip | LOC_Os01g19470.1 |
| KEGG | osa:4325779 dosa:Os01t0300600-01 |
| Entrez-Gene | 4325779 |