RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g19840.1 View Network Show in Genome Browser |
| Other Names | Os01g0304000 |
| Description | 60S ribosomal protein L29-2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11249654-11251232 Nucleotide Length: 183 |
| Protein-coding | LOC_Os01g19840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10820 LOC_Os01g16890 LOC_Os01g04730 LOC_Os01g03070 LOC_Os01g13080 LOC_Os01g07260 LOC_Os01g16240 LOC_Os01g03710 LOC_Os01g08760 LOC_Os01g16940 LOC_Os01g16030 More.. |
| Downstream Genes | LOC_Os02g30050 LOC_Os03g31090 LOC_Os05g30530 LOC_Os08g33920 LOC_Os09g24690 LOC_Os01g59990 LOC_Os07g07709 LOC_Os03g58050 LOC_Os07g12250 LOC_Os08g06040 LOC_Os02g14059 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g19840.1 |
| Rice Genome Annotation | LOC_Os01g19840.1 |
| Ricechip | LOC_Os01g19840.1 |
| KEGG | dosa:Os01t0304000-01 |
| Entrez-Gene | 4323904 |