RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g20860.1 View Network Show in Genome Browser |
| Other Names | Os01g0310100 |
| Description | phospholipase D. Active site motif family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11625658-11637076 Nucleotide Length: 2976 |
| Protein-coding | LOC_Os01g20860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 LOC_Os01g08760 |
| Downstream Genes | LOC_Os05g46720 LOC_Os06g44060 LOC_Os05g41060 LOC_Os01g59790 LOC_Os03g13100 LOC_Os03g59740 LOC_Os01g50616 LOC_Os01g73310 LOC_Os02g20850 LOC_Os05g45880 LOC_Os07g12200 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00565 rn00564 rn01100 |
| Metacyc Pathways | PWY-3561 LIPASYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g20860.1 |
| Rice Genome Annotation | LOC_Os01g20860.1 |
| Ricechip | LOC_Os01g20860.1 |
| KEGG | osa:9272440 dosa:Os01t0310100-01 |
| Entrez-Gene | 9272440 |