RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g20940.1 View Network Show in Genome Browser |
| Other Names | Os01g0311500 |
| Description | PHS1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11693809-11700025 Nucleotide Length: 2781 |
| Protein-coding | LOC_Os01g20940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g09120 LOC_Os12g21890 LOC_Os03g01750 LOC_Os12g23190 LOC_Os09g05020 LOC_Os08g29160 LOC_Os11g11070 LOC_Os12g02120 LOC_Os11g02180 LOC_Os12g07590 LOC_Os06g06090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g20940.1 |
| Rice Genome Annotation | LOC_Os01g20940.1 |
| Ricechip | LOC_Os01g20940.1 |
| KEGG | osa:4327772 dosa:Os01t0311500-01 |
| Entrez-Gene | 4327772 |