RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g20980.1 View Network Show in Genome Browser |
| Other Names | Os01g0311800 |
| Description | pectinesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11715165-11717784 Nucleotide Length: 1674 |
| Protein-coding | LOC_Os01g20980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g20090 LOC_Os04g58090 LOC_Os09g04339 LOC_Os12g39300 LOC_Os03g55240 LOC_Os03g48490 LOC_Os09g25960 LOC_Os09g25990 LOC_Os09g26000 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 rn00500 rn01100 |
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g20980.1 |
| Rice Genome Annotation | LOC_Os01g20980.1 |
| Ricechip | LOC_Os01g20980.1 |
| KEGG | osa:4327282 dosa:Os01t0311800-01 |
| Entrez-Gene | 4327282 |