RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g21320.1 View Network Show in Genome Browser |
| Other Names | Os01g0315800 |
| Description | NAD dependent epimerase/dehydratase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 11906864-11910916 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os01g21320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12900 LOC_Os01g06450 |
| Downstream Genes | LOC_Os03g55070 LOC_Os10g13810 LOC_Os04g01280 LOC_Os02g40030 LOC_Os02g57990 LOC_Os02g57180 LOC_Os03g07140 LOC_Os12g25690 LOC_Os06g25439 LOC_Os12g25700 LOC_Os02g20850 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01100 rn00500 |
| Metacyc Pathways | PWY-2582 DTDPRHAMSYN-PWY PWY-4821 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g21320.1 |
| Rice Genome Annotation | LOC_Os01g21320.1 |
| Ricechip | LOC_Os01g21320.1 |
| KEGG | osa:4327295 dosa:Os01t0315800-01 |
| Entrez-Gene | 4327295 |