RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g23620.1 View Network Show in Genome Browser |
| Other Names | Os01g0338000 |
| Description | miro, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 13286103-13288466 Nucleotide Length: 582 |
| Protein-coding | LOC_Os01g23620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 LOC_Os01g13350 LOC_Os01g10050 LOC_Os01g06510 LOC_Os01g01640 LOC_Os01g17430 LOC_Os01g20860 LOC_Os01g08450 LOC_Os01g16960 |
| Downstream Genes | LOC_Os11g24560 LOC_Os04g04020 LOC_Os07g46370 LOC_Os02g04320 LOC_Os02g52920 LOC_Os03g40270 LOC_Os06g04500 LOC_Os06g09850 LOC_Os03g57760 LOC_Os08g36994 LOC_Os06g10760 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g23620.1 |
| Rice Genome Annotation | LOC_Os01g23620.1 |
| Ricechip | LOC_Os01g23620.1 |
| KEGG | osa:4326797 dosa:Os01t0338000-01 |
| Entrez-Gene | 4326797 |