RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g24950.1 View Network Show in Genome Browser |
| Other Names | Os01g0351300 |
| Description | exocyst complex component 6, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14059572-14064407 Nucleotide Length: 2403 |
| Protein-coding | LOC_Os01g24950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g13590 LOC_Os07g09680 LOC_Os02g51430 LOC_Os06g04450 LOC_Os04g13470 LOC_Os07g13530 LOC_Os03g60530 LOC_Os01g69230 LOC_Os05g38630 LOC_Os06g38470 LOC_Os11g01420 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00521 rn00524 rn01110 rn00520 rn00051 rn00052 rn00010 rn01100 rn01120 rn00500 |
| Metacyc Pathways | P124-PWY PWY-6693 PWY-6531 PWY-842 PWY-621 P122-PWY SUCUTIL-PWY PWY-5384 PWY-3801 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g24950.1 |
| Rice Genome Annotation | LOC_Os01g24950.1 |
| Ricechip | LOC_Os01g24950.1 |
| KEGG | osa:4326480 dosa:Os01t0351300-01 |
| Entrez-Gene | 4326480 |