RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g25330.3 View Network Show in Genome Browser |
| Other Names | Os01g0355600 |
| Description | SAC9, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14308159-14316691 Nucleotide Length: 3195 |
| Protein-coding | LOC_Os01g25330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07740 |
| Downstream Genes | LOC_Os03g27930 LOC_Os02g31140 LOC_Os01g68760 LOC_Os11g46240 LOC_Os10g34380 LOC_Os01g34780 LOC_Os06g19470 LOC_Os09g03610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396e-5p osa-miR5792 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g25330.3 |
| Rice Genome Annotation | LOC_Os01g25330.3 |
| Ricechip | LOC_Os01g25330.3 |
| KEGG | osa:4326281 dosa:Os01t0355600-01 |
| Entrez-Gene | 4326281 |