RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g25440.1 View Network Show in Genome Browser |
| Other Names | Os01g0356500 |
| Description | thiamin pyrophosphokinase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14391999-14398598 Nucleotide Length: 804 |
| Protein-coding | LOC_Os01g25440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04490 LOC_Os01g02290 LOC_Os01g10890 LOC_Os01g09200 LOC_Os01g04580 LOC_Os01g02040 LOC_Os01g20900 LOC_Os01g10450 LOC_Os01g02460 LOC_Os01g12720 LOC_Os01g02600 More.. |
| Downstream Genes | LOC_Os08g39170 LOC_Os04g31270 LOC_Os05g26820 LOC_Os10g22890 LOC_Os11g07180 LOC_Os02g12670 LOC_Os06g44430 LOC_Os01g53840 LOC_Os08g05290 LOC_Os01g39970 LOC_Os06g29340 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00730 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g25440.1 |
| Rice Genome Annotation | LOC_Os01g25440.1 |
| Ricechip | LOC_Os01g25440.1 |
| KEGG | osa:4326288 dosa:Os01t0356500-01 |
| Entrez-Gene | 4326288 |