RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g25450.1 View Network Show in Genome Browser |
| Other Names | Os01g0356800 |
| Description | AIG1 family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14414670-14431253 Nucleotide Length: 16311 |
| Protein-coding | LOC_Os01g25450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g62750 LOC_Os03g02480 LOC_Os10g37690 LOC_Os02g15970 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2093-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g25450.1 |
| Rice Genome Annotation | LOC_Os01g25450.1 |
| Ricechip | LOC_Os01g25450.1 |
| KEGG | osa:4326289 dosa:Os01t0356800-00 |
| Entrez-Gene | 4326289 |