RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g25600.2 View Network Show in Genome Browser |
| Other Names | Os01g0358300 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14507658-14513133 Nucleotide Length: 1212 |
| Protein-coding | LOC_Os01g25600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g14040 LOC_Os08g42850 LOC_Os08g35420 LOC_Os04g16770 LOC_Os05g41190 LOC_Os02g02520 LOC_Os06g49160 LOC_Os03g39830 LOC_Os02g22260 LOC_Os02g50560 LOC_Os03g52660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g25600.2 |
| Rice Genome Annotation | LOC_Os01g25600.2 |
| Ricechip | LOC_Os01g25600.2 |
| KEGG | osa:4326021 dosa:Os01t0358300-01 |
| Entrez-Gene | 4326021 |