RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g25880.1 View Network Show in Genome Browser |
| Other Names | Os01g0360600 |
| Description | dephospho-CoA kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 14679306-14683435 Nucleotide Length: 693 |
| Protein-coding | LOC_Os01g25880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15260 LOC_Os01g21820 LOC_Os01g16190 LOC_Os01g11260 LOC_Os01g24950 |
| Downstream Genes | LOC_Os02g11050 LOC_Os08g41790 LOC_Os06g04280 LOC_Os12g19370 LOC_Os09g32820 LOC_Os06g39870 LOC_Os11g16370 LOC_Os02g17320 LOC_Os08g07840 LOC_Os06g03770 LOC_Os07g43170 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00770 rn01100 rn00240 |
| Metacyc Pathways | P1-PWY PWY0-163 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g25880.1 |
| Rice Genome Annotation | LOC_Os01g25880.1 |
| Ricechip | LOC_Os01g25880.1 |
| KEGG | osa:4326028 dosa:Os01t0360600-01 |
| Entrez-Gene | 4326028 |