RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g27730.1 View Network Show in Genome Browser |
| Other Names | Os01g0375000 |
| Description | GTPase of unknown function domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 15462065-15466760 Nucleotide Length: 2223 |
| Protein-coding | LOC_Os01g27730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07080 LOC_Os01g24690 LOC_Os01g16890 LOC_Os01g10820 LOC_Os01g17330 LOC_Os01g08770 LOC_Os01g14830 LOC_Os01g05900 LOC_Os01g05630 LOC_Os01g05610 LOC_Os01g06010 More.. |
| Downstream Genes | LOC_Os03g49210 LOC_Os07g25440 LOC_Os06g09570 LOC_Os07g01920 LOC_Os03g58810 LOC_Os03g61560 LOC_Os02g49270 LOC_Os02g37870 LOC_Os08g32090 LOC_Os03g22890 LOC_Os07g44620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g27730.1 |
| Rice Genome Annotation | LOC_Os01g27730.1 |
| Ricechip | LOC_Os01g27730.1 |
| KEGG | osa:4325442 dosa:Os01t0375000-01 |
| Entrez-Gene | 4325442 |