RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g27750.1 View Network Show in Genome Browser |
| Other Names | Os01g0375200 |
| Description | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 15479968-15493549 Nucleotide Length: 1530 |
| Protein-coding | LOC_Os01g27750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os02g16630 LOC_Os11g14950 LOC_Os09g36800 LOC_Os12g04440 LOC_Os07g34640 LOC_Os06g04280 LOC_Os02g36340 LOC_Os03g03450 LOC_Os04g53200 LOC_Os03g61120 LOC_Os05g38570 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | ARO-PWY QUINATEDEG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g27750.1 |
| Rice Genome Annotation | LOC_Os01g27750.1 |
| Ricechip | LOC_Os01g27750.1 |
| KEGG | osa:4325444 dosa:Os01t0375200-01 |
| Entrez-Gene | 4325444 |