RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g27940.1 View Network Show in Genome Browser |
| Other Names | Os01g0377500 |
| Description | cyclin-L1-1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 15618221-15622694 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os01g27940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01160 LOC_Os01g05610 LOC_Os01g05630 LOC_Os01g05970 LOC_Os01g05900 LOC_Os01g06010 LOC_Os01g23590 |
| Downstream Genes | LOC_Os02g39720 LOC_Os06g14530 LOC_Os07g34589 LOC_Os01g58220 LOC_Os08g37960 LOC_Os04g41100 LOC_Os02g39010 LOC_Os05g41900 LOC_Os09g36440 LOC_Os06g08840 LOC_Os03g52750 More.. |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g27940.1 |
| Rice Genome Annotation | LOC_Os01g27940.1 |
| Ricechip | LOC_Os01g27940.1 |
| KEGG | osa:4325450 dosa:Os01t0377500-01 |
| Entrez-Gene | 4325450 |