RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g28690.1 View Network Show in Genome Browser |
| Other Names | Os01g0383900 |
| Description | nucleoporin autopeptidase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 16061947-16067662 Nucleotide Length: 1854 |
| Protein-coding | LOC_Os01g28690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os04g21660 LOC_Os05g49470 LOC_Os08g07960 LOC_Os05g48620 LOC_Os01g44394 LOC_Os03g03560 LOC_Os05g28510 LOC_Os10g42250 LOC_Os07g43316 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g28690.1 |
| Rice Genome Annotation | LOC_Os01g28690.1 |
| Ricechip | LOC_Os01g28690.1 |
| KEGG | osa:4325429 dosa:Os01t0383900-01 |
| Entrez-Gene | 4325429 |