RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g31690.2 View Network Show in Genome Browser |
| Other Names | Os01g0501800 |
| Description | oxygen-evolving enhancer protein 1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 17349311-17350816 Nucleotide Length: 948 |
| Protein-coding | LOC_Os01g31690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10400 LOC_Os01g22520 |
| Downstream Genes | LOC_Os09g30340 LOC_Os04g33830 LOC_Os03g56670 LOC_Os04g38600 LOC_Os08g02630 LOC_Os07g37240 LOC_Os06g01210 LOC_Os11g47970 LOC_Os08g10020 LOC_Os08g01380 LOC_Os12g19381 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g31690.2 |
| Rice Genome Annotation | LOC_Os01g31690.2 |
| Ricechip | LOC_Os01g31690.2 |
| KEGG | osa:4324479 dosa:Os01t0501800-01 |
| Entrez-Gene | 4324479 |