RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g32080.2 View Network Show in Genome Browser |
| Other Names | Os01g0505400 |
| Description | thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 17560756-17564948 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os01g32080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16190 LOC_Os01g16240 LOC_Os01g17190 LOC_Os01g16030 |
| Downstream Genes | LOC_Os02g39570 LOC_Os11g14950 LOC_Os01g46380 LOC_Os02g05780 LOC_Os05g49800 LOC_Os05g39310 LOC_Os05g39320 LOC_Os10g30970 LOC_Os03g18220 LOC_Os07g49250 LOC_Os12g04440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g32080.2 |
| Rice Genome Annotation | LOC_Os01g32080.2 |
| Ricechip | LOC_Os01g32080.2 |
| KEGG | osa:4324491 dosa:Os01t0505400-01 |
| Entrez-Gene | 4324491 |