RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g32364.1 View Network Show in Genome Browser |
| Other Names | Os01g0508000 |
| Description | Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 17756051-17765020 Nucleotide Length: 1551 |
| Protein-coding | LOC_Os01g32364 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08750 |
| Downstream Genes | LOC_Os11g29200 LOC_Os12g24250 LOC_Os10g35370 LOC_Os01g37130 LOC_Os07g43390 LOC_Os02g02410 LOC_Os04g32950 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5836 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 rn01110 rn00460 rn00940 |
| Metacyc Pathways | PWY-5176 PWY-4441 PWY-3121 PWY-6002 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g32364.1 |
| Rice Genome Annotation | LOC_Os01g32364.1 |
| Ricechip | LOC_Os01g32364.1 |
| KEGG | osa:4324050 dosa:Os01t0508000-01 |
| Entrez-Gene | 4324050 |