RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g32730.1 View Network Show in Genome Browser |
| Other Names | Os01g0510600 |
| Description | tetratricopeptide repeat containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 17947747-17951664 Nucleotide Length: 975 |
| Protein-coding | LOC_Os01g32730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03660 |
| Downstream Genes | LOC_Os03g02640 LOC_Os02g46750 LOC_Os09g24670 LOC_Os02g41470 LOC_Os07g38300 LOC_Os01g58470 LOC_Os03g56840 LOC_Os07g07310 LOC_Os11g37130 LOC_Os03g55930 LOC_Os04g44440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g32730.1 |
| Rice Genome Annotation | LOC_Os01g32730.1 |
| Ricechip | LOC_Os01g32730.1 |
| KEGG | osa:4324026 dosa:Os01t0510600-01 |
| Entrez-Gene | 4324026 |