RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g32750.1 View Network Show in Genome Browser |
Other Names | Os01g0510800 |
Description | TATA binding protein-associated factor, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 17960865-17968602 Nucleotide Length: 1626 |
Protein-coding | LOC_Os01g32750 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0030154 | cell differentiation | Biological Process | IEA | |
GO:0016049 | cell growth | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0009856 | pollination | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g23630 LOC_Os01g11580 LOC_Os01g05900 LOC_Os01g05630 LOC_Os01g05610 LOC_Os01g06010 LOC_Os01g05970 LOC_Os01g16890 |
Downstream Genes | LOC_Os03g29470 LOC_Os01g63940 LOC_Os06g44030 LOC_Os03g53960 LOC_Os10g28040 LOC_Os09g26180 LOC_Os05g28010 LOC_Os01g46020 LOC_Os07g45064 LOC_Os12g39070 LOC_Os03g45410 More.. |
miRNA Regulations | |
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miRNAs | osa-miR396a-5p osa-miR396b-5p osa-miR396c-5p |
Database Links | |
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Gramene | LOC_Os01g32750.1 |
Rice Genome Annotation | LOC_Os01g32750.1 |
Ricechip | LOC_Os01g32750.1 |
KEGG | osa:4324027 dosa:Os01t0510800-01 |
Entrez-Gene | 4324027 |