RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g32880.1 View Network Show in Genome Browser |
| Other Names | Os01g0512200 |
| Description | AP-3 complex subunit delta, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18051517-18054939 Nucleotide Length: 2838 |
| Protein-coding | LOC_Os01g32880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25110 LOC_Os01g16030 |
| Downstream Genes | LOC_Os01g74180 LOC_Os03g12710 LOC_Os07g10150 LOC_Os03g12590 LOC_Os04g11880 LOC_Os05g46550 LOC_Os01g50770 LOC_Os02g44810 LOC_Os01g67040 LOC_Os06g09330 LOC_Os07g37650 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2931 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g32880.1 |
| Rice Genome Annotation | LOC_Os01g32880.1 |
| Ricechip | LOC_Os01g32880.1 |
| KEGG | osa:4324036 dosa:Os01t0512200-01 |
| Entrez-Gene | 4324036 |