RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g32930.1 View Network Show in Genome Browser |
| Other Names | Os01g0512800 |
| Description | SGS domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18077464-18078185 Nucleotide Length: 672 |
| Protein-coding | LOC_Os01g32930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g26910 LOC_Os09g36830 LOC_Os08g28820 LOC_Os09g10200 LOC_Os08g28800 LOC_Os07g05180 LOC_Os09g10260 LOC_Os07g05160 LOC_Os09g10270 LOC_Os09g10230 LOC_Os07g05150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g32930.1 |
| Rice Genome Annotation | LOC_Os01g32930.1 |
| Ricechip | LOC_Os01g32930.1 |
| KEGG | dosa:Os01t0512800-00 |