RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g33160.1 View Network Show in Genome Browser |
| Other Names | Os01g0516200 |
| Description | stress responsive A/B Barrel domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18259565-18267198 Nucleotide Length: 351 |
| Protein-coding | LOC_Os01g33160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11710 LOC_Os01g25560 |
| Downstream Genes | LOC_Os04g38750 LOC_Os03g02020 LOC_Os12g34890 LOC_Os04g42620 LOC_Os03g21900 LOC_Os07g06450 LOC_Os10g06000 LOC_Os10g05990 LOC_Os10g05980 LOC_Os08g41990 LOC_Os09g10760 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g33160.1 |
| Rice Genome Annotation | LOC_Os01g33160.1 |
| Ricechip | LOC_Os01g33160.1 |
| KEGG | osa:9271975 dosa:Os01t0516200-00 |
| Entrez-Gene | 9271975 |