RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g33800.2 View Network Show in Genome Browser |
| Other Names | Os01g0521500 |
| Description | heat shock protein DnaJ, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18600976-18611575 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os01g33800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g33360 |
| Downstream Genes | LOC_Os04g35180 LOC_Os02g39870 LOC_Os09g11250 LOC_Os12g14070 LOC_Os05g23740 LOC_Os05g08840 LOC_Os11g47760 LOC_Os12g05760 LOC_Os09g31486 LOC_Os06g46600 LOC_Os03g16880 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2093-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g33800.2 |
| Rice Genome Annotation | LOC_Os01g33800.2 |
| Ricechip | LOC_Os01g33800.2 |
| KEGG | dosa:Os01t0521500-01 |
| Entrez-Gene | 4323951 |