RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g33960.1 View Network Show in Genome Browser |
| Other Names | |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18684016-18693589 Nucleotide Length: 2142 |
| Protein-coding | LOC_Os01g33960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g50540 LOC_Os03g56300 LOC_Os07g45090 LOC_Os05g43360 LOC_Os02g24574 LOC_Os01g52214 LOC_Os12g14939 LOC_Os05g45730 LOC_Os03g30610 LOC_Os07g41300 LOC_Os07g02580 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5837.2 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g33960.1 |
| Rice Genome Annotation | LOC_Os01g33960.1 |
| Ricechip | LOC_Os01g33960.1 |