RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g34200.2 View Network Show in Genome Browser |
| Other Names | Os01g0526200 |
| Description | AATF, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18853575-18857379 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os01g34200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33030 LOC_Os01g07080 LOC_Os01g08770 LOC_Os01g27730 LOC_Os01g13730 LOC_Os01g25610 LOC_Os01g01689 LOC_Os01g04730 LOC_Os01g33050 LOC_Os01g08450 LOC_Os01g23620 More.. |
| Downstream Genes | LOC_Os01g68310 LOC_Os06g03780 LOC_Os10g10434 LOC_Os03g51900 LOC_Os03g22880 LOC_Os07g29320 LOC_Os04g25360 LOC_Os04g25990 LOC_Os03g49210 LOC_Os12g07300 LOC_Os07g33340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g34200.2 |
| Rice Genome Annotation | LOC_Os01g34200.2 |
| Ricechip | LOC_Os01g34200.2 |
| KEGG | dosa:Os01t0526200-01 |
| Entrez-Gene | 4323936 |