RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g34350.1 View Network Show in Genome Browser |
| Other Names | Os01g0527600 |
| Description | RNA-dependent RNA polymerase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 18940388-18945666 Nucleotide Length: 3657 |
| Protein-coding | LOC_Os01g34350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009875 | pollen-pistil interaction | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g60110 LOC_Os07g12490 LOC_Os05g40290 LOC_Os12g32240 LOC_Os07g40580 LOC_Os07g02210 LOC_Os05g34670 LOC_Os03g55150 LOC_Os01g66300 LOC_Os01g60260 LOC_Os06g36050 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00230 |
| Reference | |
|---|---|
| PubMed | 10409508 20511295 10409508 18160413 22443269 22142475 12750344 17804793 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g34350.1 |
| Rice Genome Annotation | LOC_Os01g34350.1 |
| Ricechip | LOC_Os01g34350.1 |
| KEGG | dosa:Os01t0527600-01 |
| Entrez-Gene | 4323938 |