RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g34970.2 View Network Show in Genome Browser |
| Other Names | Os01g0533900 |
| Description | MDR-like ABC transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 19352055-19359550 Nucleotide Length: 2016 |
| Protein-coding | LOC_Os01g34970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g01200 LOC_Os04g51380 LOC_Os05g48750 LOC_Os02g05340 LOC_Os06g48640 LOC_Os09g15750 LOC_Os01g53600 LOC_Os01g50160 LOC_Os08g25200 LOC_Os02g45650 LOC_Os01g44130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2873b osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g34970.2 |
| Rice Genome Annotation | LOC_Os01g34970.2 |
| Ricechip | LOC_Os01g34970.2 |
| KEGG | osa:4326410 dosa:Os01t0533900-01 |
| Entrez-Gene | 4326410 |