RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g36390.1 View Network Show in Genome Browser |
Other Names | Os01g0544450 |
Description | MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 20192025-20197004 Nucleotide Length: 2589 |
Protein-coding | LOC_Os01g36390 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0006259 | DNA metabolic process | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g14610 LOC_Os01g08970 LOC_Os01g16650 LOC_Os01g08450 LOC_Os01g25610 LOC_Os01g10820 LOC_Os01g26160 LOC_Os01g32800 LOC_Os01g16960 LOC_Os01g17330 LOC_Os01g04730 More.. |
Downstream Genes | LOC_Os05g14590 LOC_Os12g37400 LOC_Os05g39850 LOC_Os11g29380 LOC_Os03g02680 LOC_Os03g05300 LOC_Os03g01850 LOC_Os02g55410 LOC_Os03g08640 LOC_Os01g63710 LOC_Os04g10650 More.. |
Database Links | |
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Gramene | LOC_Os01g36390.1 |
Rice Genome Annotation | LOC_Os01g36390.1 |
Ricechip | LOC_Os01g36390.1 |
KEGG | dosa:Os01t0544450-01 |