RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g36620.1 View Network Show in Genome Browser |
| Other Names | Os01g0546800 |
| Description | pectate lyase family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 20317862-20319378 Nucleotide Length: 1095 |
| Protein-coding | LOC_Os01g36620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os04g45190 LOC_Os07g44830 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g36620.1 |
| Rice Genome Annotation | LOC_Os01g36620.1 |
| Ricechip | LOC_Os01g36620.1 |
| KEGG | osa:4326883 dosa:Os01t0546800-01 |
| Entrez-Gene | 4326883 |