RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g37130.2 View Network Show in Genome Browser |
| Other Names | Os01g0552300 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 20738583-20742431 Nucleotide Length: 1167 |
| Protein-coding | LOC_Os01g37130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32364 LOC_Os01g26280 LOC_Os01g20900 LOC_Os01g26174 LOC_Os01g01410 LOC_Os01g14932 LOC_Os01g04450 LOC_Os01g02430 |
| Downstream Genes | LOC_Os06g22810 LOC_Os05g44990 LOC_Os06g10230 LOC_Os02g53720 LOC_Os12g01740 LOC_Os01g41730 LOC_Os11g01740 LOC_Os04g59000 LOC_Os05g06990 LOC_Os11g35500 LOC_Os02g34790 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g37130.2 |
| Rice Genome Annotation | LOC_Os01g37130.2 |
| Ricechip | LOC_Os01g37130.2 |
| KEGG | osa:4325851 dosa:Os01t0552300-01 |
| Entrez-Gene | 4325851 |