RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g37560.3 View Network Show in Genome Browser |
| Other Names | Os01g0556400 |
| Description | chaperone protein dnaJ 49, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 20987760-20992534 Nucleotide Length: 1143 |
| Protein-coding | LOC_Os01g37560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g33360 LOC_Os01g06454 |
| Downstream Genes | LOC_Os02g39870 LOC_Os04g35180 LOC_Os11g47760 LOC_Os12g38180 LOC_Os09g11250 LOC_Os12g14070 LOC_Os05g23740 LOC_Os05g08840 LOC_Os12g05760 LOC_Os08g25090 LOC_Os11g08470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g37560.3 |
| Rice Genome Annotation | LOC_Os01g37560.3 |
| Ricechip | LOC_Os01g37560.3 |
| KEGG | osa:4324566 dosa:Os01t0556400-01 |
| Entrez-Gene | 4324566 |