RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g37690.1 View Network Show in Genome Browser |
| Other Names | Os01g0557500 |
| Description | sodium/calcium exchanger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21071370-21076730 Nucleotide Length: 1356 |
| Protein-coding | LOC_Os01g37690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g01640 LOC_Os06g40370 LOC_Os05g23240 LOC_Os03g63420 LOC_Os04g51610 LOC_Os10g30070 LOC_Os03g15780 LOC_Os01g69900 LOC_Os05g46360 LOC_Os03g17310 LOC_Os03g06350 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Reference | |
|---|---|
| PubMed | 16275657 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g37690.1 |
| Rice Genome Annotation | LOC_Os01g37690.1 |
| Ricechip | LOC_Os01g37690.1 |
| KEGG | osa:4324573 dosa:Os01t0557500-01 |
| Entrez-Gene | 4324573 |