RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g37910.2 View Network Show in Genome Browser |
| Other Names | Os01g0559600 |
| Description | vacuolar-processing enzyme precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21230393-21234929 Nucleotide Length: 1233 |
| Protein-coding | LOC_Os01g37910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27630 LOC_Os01g27210 LOC_Os01g28450 LOC_Os01g27390 LOC_Os01g25100 LOC_Os01g27360 LOC_Os01g27340 LOC_Os01g27260 LOC_Os01g27380 LOC_Os01g28500 LOC_Os01g27480 More.. |
| Downstream Genes | LOC_Os04g55410 LOC_Os08g39694 LOC_Os07g26870 LOC_Os03g14400 LOC_Os09g23070 LOC_Os05g01700 LOC_Os01g73530 LOC_Os06g22080 LOC_Os02g48350 LOC_Os04g46480 LOC_Os03g14420 More.. |
| Reference | |
|---|---|
| PubMed | 21972902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g37910.2 |
| Rice Genome Annotation | LOC_Os01g37910.2 |
| Ricechip | LOC_Os01g37910.2 |
| KEGG | osa:4324683 dosa:Os01t0559600-01 |
| Entrez-Gene | 4324683 |